Alphabet Member List

This is the complete list of members for Alphabet, including all inherited members.

Alphabet(size_t base_size, const char *str)	Alphabet	[protected]
BaseSize() const	Alphabet	[inline]
Decode(const int &i) const	Alphabet	[inline]
Decode(const unsigned int &i) const (defined in Alphabet)	Alphabet	[inline]
Decode(const long &i) const (defined in Alphabet)	Alphabet	[inline]
Decode(const unsigned long &i) const (defined in Alphabet)	Alphabet	[inline]
Encode(const char &ch) const	Alphabet	[inline]
Encoder (defined in Alphabet)	Alphabet	[friend]
Gap() const	Alphabet	[inline]
GapChar() const (defined in Alphabet)	Alphabet	[inline]
GetAlphabet(const std::string &str)	Alphabet	[static]
intToLetter	Alphabet	[protected]
intToSet	Alphabet	[protected]
IupacSet(int i) const	Alphabet	[inline]
letterToInt	Alphabet	[protected]
Match(const Alphabet &a, const Alphabet &b) (defined in Alphabet)	Alphabet	[inline, static]
n_basic_letters	Alphabet	[protected]
Name() const =0 (defined in Alphabet)	Alphabet	[pure virtual]
Probe(int letter, int mask) const	Alphabet
Size() const	Alphabet	[inline]
ValidEncode(const char &ch) const (defined in Alphabet)	Alphabet	[inline]
~Alphabet() (defined in Alphabet)	Alphabet	[inline, virtual]