ppALIGN API documentation

DriverSampling Member List

This is the complete list of members for DriverSampling, including all inherited members.
AfterComputation()DriverSampling [virtual]
alternative_alignmentsPartitionDriverBase
BeforeComputation()DriverSampling [virtual]
ComputePosterior(bool doit)PartitionDriverBase [inline]
do_add_dangling (defined in PartitionDriverBase)PartitionDriverBase [protected]
do_compute_posterior (defined in PartitionDriverBase)PartitionDriverBase [protected]
driver_namePartitionDriverBase [protected]
DriverSampling(DRand48 &_rng)DriverSampling
ForwardDone()PartitionDriverBase [inline, virtual]
GetNumber()DriverSampling
LocalDangling(bool dang)PartitionDriverBase [inline]
Name() const PartitionDriverBase
NeedBackward()PartitionDriverBase [inline, virtual]
NeedFirstBackward()PartitionDriverBase [inline, virtual]
NeedForward()PartitionDriverBase [inline, virtual]
NeedForwardBackward()PartitionDriverBase [inline, virtual]
NeedInitStrip()PartitionDriverBase [inline, virtual]
NeedMarkovChain()DriverSampling [inline, virtual]
OnBackward(long i, const PartitionWorkspace::RowInfo &last_row, const PartitionWorkspace::RowInfo &curr_row, const PartitionWorkspace::const_iterator last, const PartitionWorkspace::const_iterator curr)PartitionDriverBase [inline, virtual]
OnForward(long i, const PartitionWorkspace::RowInfo &last_row, const PartitionWorkspace::RowInfo &curr_row, const PartitionWorkspace::const_iterator last, const PartitionWorkspace::const_iterator curr)PartitionDriverBase [inline, virtual]
OnForwardBackward(PartitionWorkspace::ForwardBackwardInfo &fb_info)PartitionDriverBase [inline, virtual]
OnMarkovChain(PartitionWorkspace::ForwardBackwardInfo &fb_info, Workspace< PartitionWorkspace::Transition >::const_iterator curr_markov, const xdouble &row_z)DriverSampling [virtual]
PartitionDriverBase()PartitionDriverBase
PartitionWorkspace (defined in PartitionDriverBase)PartitionDriverBase [friend]
Program (defined in PartitionDriverBase)PartitionDriverBase [friend]
ProvideAlternativePosteriorProb()PartitionDriverBase [inline, virtual]
SetNumber(size_t n)DriverSampling
SetWorkspace(PartitionWorkspace *ws)PartitionDriverBase [protected, virtual]
wsPartitionDriverBase [protected]
~PartitionDriverBase()PartitionDriverBase [inline, virtual]