ppALIGN API documentation

ProteinAlphabet Class Reference

#include <alphabet.hpp>

Inheritance diagram for ProteinAlphabet:
Alphabet

List of all members.

Public Member Functions

virtual const char * Name () const

Detailed Description

Amino acid alphabet 0 A Ala Alanine 1 R Arg Arginine 2 N Asn Asparagine 3 D Asp Aspartic acid 4 C Cys Cysteine 5 Q Gln Glutamine 6 E Glu Glutamic acid 7 G Gly Glycine 8 H His Histidine 9 I Ile Isoleucine 10 L Leu Leucine 11 K Lys Lysine 12 M Met Methionine 13 F Phe Phenylalanine 14 P Pro Proline 15 S Ser Serine 16 T Thr Threonine 17 W Trp Tryptophan 18 Y Tyr Tyrosine 19 V Val Valine 20 B Asx Aspartic acid or Asparagine 21 Z Glx Glutamine or Glutamic acid 22 X Xaa Any amino acid 23 - Gap

Definition at line 274 of file alphabet.hpp.


The documentation for this class was generated from the following file: