Get it

The package is available from the sourceforge download page. Compile and install the package with CMake:

tar zxvf ppalign-1.0.tar.gz
cd ppalign-1.0
cmake .
make 
make test
make install
make clean

If you don't have root permission call CMake as follows:

cmake -D CMAKE_INSTALL_PREFIX=/my/personal/install/prefix .

If the GD and expat libraries are not installed in a standard directory, try the following options:

cmake -D GD_INCLUDE=/path/to/header -D GD_LIB=/path/to/lib  \
      -D EXAPT_INCLUDE=/path/to/header -D EXPAT_LIB=/path/to/lib .

If the GD library or Expat is not installed on your system use the following options to configure the package:

cmake -D ONLY_LIB=true .

In this case only the core library of ppALIGN will be compiled, which does not depend on the packages.

ppALIGN