PartitionWorkspace Member List

This is the complete list of members for PartitionWorkspace, including all inherited members.

AddDriver(PartitionDriverBase &driver)	PartitionWorkspace
cell_t typedef	Workspace< DynCell< xdouble > >
Cols()	Workspace< DynCell< xdouble > >	[inline]
const_iterator typedef	Workspace< DynCell< xdouble > >
const_reverse_iterator typedef	Workspace< DynCell< xdouble > >
ForwardDone()	CheckpointDriver	[inline, private, virtual]
GetDanglingBackwardDelete(long j) const	PartitionWorkspace	[inline]
GetDanglingBackwardInsert(long i) const	PartitionWorkspace	[inline]
GetDanglingForwardDelete(long j) const	PartitionWorkspace	[inline]
GetDanglingForwardInsert(long i) const	PartitionWorkspace	[inline]
GetDeletionProb(long j) const	PartitionWorkspace	[inline]
GetInsertionProb(long i) const	PartitionWorkspace	[inline]
GetInvZ() const	PartitionWorkspace	[inline]
GetLastRowInfo(long i)	PartitionWorkspace	[inline]
GetLastRowInfo(long i) const	PartitionWorkspace	[inline]
GetNullProb()	PartitionWorkspace	[inline]
GetPairProb1(long i) const	PartitionWorkspace	[inline]
GetPairProb2(long j) const	PartitionWorkspace	[inline]
GetRowInfo(long i)	PartitionWorkspace	[inline]
GetRowInfo(long i) const	PartitionWorkspace	[inline]
GetWeight() const	PartitionWorkspace	[inline]
GetZ() const	PartitionWorkspace	[inline]
iterator typedef	Workspace< DynCell< xdouble > >
Length1() const	PartitionWorkspace	[inline]
Length2() const	PartitionWorkspace	[inline]
LocalStrip(Sequence &seq1, Sequence &seq2, Align &align, const Weight &weight, long stip_size=10, long max_strip_size=50, long inc_strip_size=10)	PartitionWorkspace
parent_t typedef	Workspace< DynCell< xdouble > >
PartitionFunction(const Sequence &seq1, const Sequence &seq2, const Weight &weight)	PartitionWorkspace
PartitionFunction(const Sequence &seq1, const Sequence &seq2, const Align &a, const Weight &weight, long strip_size=10, long max_strip_size=50, long inc_strip_size=10)	PartitionWorkspace
PartitionWorkspace(size_t s)	PartitionWorkspace
RemoveAllDrivers()	PartitionWorkspace
RemoveDriver(PartitionDriverBase &driver)	PartitionWorkspace
reverse_iterator typedef	Workspace< DynCell< xdouble > >
RowBegin(size_t row)	Workspace< DynCell< xdouble > >	[inline]
Rows()	Workspace< DynCell< xdouble > >	[inline]
Seq1Begin() const	PartitionWorkspace	[inline]
Seq2Begin() const	PartitionWorkspace	[inline]
SetupTable(size_t n_rows, size_t n_cols)	Workspace< DynCell< xdouble > >
StartBackward()	CheckpointDriver	[private, virtual]
trans_iterator typedef	PartitionWorkspace
Workspace(size_t n_cells)	Workspace< DynCell< xdouble > >
~CheckpointDriver()	CheckpointDriver	[inline, private, virtual]
~PartitionWorkspace()	PartitionWorkspace