Here is a list of all documented class members with links to the class documentation for each member:

- s -

• scale : Weight
• Score() : Align
• ScoreMatrix() : ScoreMatrix
• seed() : DRand48
• segment_const_iterator : AlignOverlap
• segment_iterator : AlignOverlap
• Seq1Begin() : PartitionWorkspace
• Seq2Begin() : PartitionWorkspace
• SeqEnd() : Align
• SeqOffset() : Align
• Sequence() : Sequence
• SetAlign() : DriverPosterProb
• SetMaxSize() : DriverPosterDecode
• SetNumber() : DriverSampling
• SetStart() : DriverLocalBound
• SetStartPos() : Align
• SetupTable() : Workspace< CELL >
• SetWorkspace() : PartitionDriverBase
• Size() : Alphabet
• SpaceAvail() : DemoCheckpointDriver , CheckpointDriver
• SpaceRequired() : CheckpointDriver , DemoCheckpointDriver
• start_pos : AlignOverlap::AlignSegment
• StartBackward() : CheckpointDriver , DemoCheckpointDriver
• StreamOut() : Weight
• StreamOutPartition() : AlignOverlap
• StreamOutQuery() : AlignOverlap::AlignSegment
• StreamOutSubject() : AlignOverlap::AlignSegment